after importing products into new magento, item counts in categories are wrong

[Petros]

I have magento 1.6.2 and other one 1.9.2 in other server, I moved all categories, products, attributes and media.
The new store looks ok, but in admin part I found difference between old store
at first when I search same term in stores, I get different results
products count in categories is not same as old one
reindexing, removing chache does not help

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